Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.64■■□□□ 1.54
SH2D4AQ9H788 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
SH2D4AQ9H788 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SH2D4AQ9H788 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
SH2D4AQ9H788 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.64■■□□□ 1.54
SH2D4AQ9H788 AL138781.1-201ENST00000566567 1274 ntBASIC24.64■■□□□ 1.54
SH2D4AQ9H788 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SH2D4AQ9H788 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SH2D4AQ9H788 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.64■■□□□ 1.53
SH2D4AQ9H788 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.64■■□□□ 1.53
SH2D4AQ9H788 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SH2D4AQ9H788 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SH2D4AQ9H788 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.63■■□□□ 1.53
SH2D4AQ9H788 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 AC073210.2-201ENST00000430369 194 ntBASIC24.62■■□□□ 1.53
SH2D4AQ9H788 AC069152.1-201ENST00000438030 544 ntBASIC24.62■■□□□ 1.53
SH2D4AQ9H788 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 AC243732.1-201ENST00000612648 864 ntBASIC24.62■■□□□ 1.53
SH2D4AQ9H788 AC133041.1-202ENST00000642053 222 ntBASIC24.62■■□□□ 1.53
SH2D4AQ9H788 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SH2D4AQ9H788 C1orf229-201ENST00000623686 2258 ntBASIC24.61■■□□□ 1.53
SH2D4AQ9H788 RBM17P2-201ENST00000616397 1405 ntBASIC24.61■■□□□ 1.53
SH2D4AQ9H788 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 CD99P1-205ENST00000527459 561 ntBASIC24.61■■□□□ 1.53
SH2D4AQ9H788 AL162412.1-201ENST00000567129 965 ntBASIC24.61■■□□□ 1.53
SH2D4AQ9H788 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
SH2D4AQ9H788 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 AC080038.3-201ENST00000623346 1952 ntBASIC24.6■■□□□ 1.53
SH2D4AQ9H788 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 AC061975.6-201ENST00000579045 1553 ntBASIC24.6■■□□□ 1.53
SH2D4AQ9H788 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 MKRN4P-201ENST00000444706 1521 ntBASIC24.6■■□□□ 1.53
SH2D4AQ9H788 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
SH2D4AQ9H788 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 AL512625.2-201ENST00000417533 625 ntBASIC24.59■■□□□ 1.53
SH2D4AQ9H788 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 MIR4758-201ENST00000577688 71 ntBASIC24.59■■□□□ 1.53
SH2D4AQ9H788 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
SH2D4AQ9H788 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
SH2D4AQ9H788 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.58■■□□□ 1.53
SH2D4AQ9H788 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.58■■□□□ 1.53
SH2D4AQ9H788 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SH2D4AQ9H788 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.58■■□□□ 1.53
SH2D4AQ9H788 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SH2D4AQ9H788 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.58■■□□□ 1.53
SH2D4AQ9H788 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SH2D4AQ9H788 KRT18P6-201ENST00000555540 1265 ntBASIC24.58■■□□□ 1.53
SH2D4AQ9H788 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms