Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNF1Q9H3M0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 SMG8-203ENST00000578922 2178 ntBASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNF1Q9H3M0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
KCNF1Q9H3M0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 AC137630.3-201ENST00000607245 391 ntBASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.01■■□□□ 1.27
KCNF1Q9H3M0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23■■□□□ 1.27
KCNF1Q9H3M0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
KCNF1Q9H3M0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
KCNF1Q9H3M0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNF1Q9H3M0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
KCNF1Q9H3M0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
KCNF1Q9H3M0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23■■□□□ 1.27
KCNF1Q9H3M0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNF1Q9H3M0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNF1Q9H3M0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23■■□□□ 1.27
KCNF1Q9H3M0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNF1Q9H3M0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
KCNF1Q9H3M0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
KCNF1Q9H3M0 AC099778.1-201ENST00000568593 1911 ntBASIC23■■□□□ 1.27
KCNF1Q9H3M0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
KCNF1Q9H3M0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNF1Q9H3M0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
KCNF1Q9H3M0 AC098818.2-201ENST00000564925 2320 ntBASIC22.99■■□□□ 1.27
KCNF1Q9H3M0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
KCNF1Q9H3M0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNF1Q9H3M0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms