Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 BX005040.4-201ENST00000637145 1518 ntBASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 AL137060.1-201ENST00000618151 2648 ntBASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC68Q9H2F9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC68Q9H2F9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC68Q9H2F9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC68Q9H2F9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 AL354811.1-201ENST00000610286 706 ntBASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 AC005837.3-201ENST00000612163 286 ntBASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC68Q9H2F9 AC005224.4-201ENST00000583262 1652 ntBASIC21.02■□□□□ 0.95
CCDC68Q9H2F9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CCDC68Q9H2F9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CCDC68Q9H2F9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC68Q9H2F9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.01■□□□□ 0.95
CCDC68Q9H2F9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCDC68Q9H2F9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms