Protein–RNA interactions for Protein: Q9BZR9

TRIM8, Probable E3 ubiquitin-protein ligase TRIM8, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8Q9BZR9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM8Q9BZR9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 pRNA.6-201ENST00000610482 90 ntBASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 pRNA.5-201ENST00000612139 90 ntBASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 pRNA.11-201ENST00000618423 90 ntBASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 pRNA.13-201ENST00000619112 90 ntBASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM8Q9BZR9 OR7E47P-201ENST00000546390 1422 ntBASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM8Q9BZR9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
TRIM8Q9BZR9 LINC01006-201ENST00000333319 2292 ntBASIC20.27■□□□□ 0.83
TRIM8Q9BZR9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM8Q9BZR9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 DUX4L19-201ENST00000557448 1267 ntBASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM8Q9BZR9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM8Q9BZR9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM8Q9BZR9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 AC090192.1-201ENST00000517740 490 ntBASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 AC099791.2-201ENST00000605725 427 ntBASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM8Q9BZR9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms