Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2Q9BSQ5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCM2Q9BSQ5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCM2Q9BSQ5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCM2Q9BSQ5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCM2Q9BSQ5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.77■□□□□ 0.91
CCM2Q9BSQ5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCM2Q9BSQ5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 AP001160.3-201ENST00000601484 763 ntBASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2Q9BSQ5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 AC010141.2-201ENST00000452426 721 ntBASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.74■□□□□ 0.91
CCM2Q9BSQ5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 AC022517.1-201ENST00000592429 346 ntBASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2Q9BSQ5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 AC008175.2-201ENST00000612840 297 ntBASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2Q9BSQ5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms