Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 MIR3621-201ENST00000580529 85 ntBASIC18.05■□□□□ 0.48
NICN1Q9BSH3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 AP004607.7-201ENST00000527152 1677 ntBASIC18.04■□□□□ 0.48
NICN1Q9BSH3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 SRD5A1P1-201ENST00000442297 786 ntBASIC18.04■□□□□ 0.48
NICN1Q9BSH3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
NICN1Q9BSH3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
NICN1Q9BSH3 FEM1AP1-201ENST00000431297 1995 ntBASIC18.02■□□□□ 0.48
NICN1Q9BSH3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 AL034346.1-201ENST00000568244 1277 ntBASIC18.02■□□□□ 0.48
NICN1Q9BSH3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NICN1Q9BSH3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.02■□□□□ 0.47
NICN1Q9BSH3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NICN1Q9BSH3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NICN1Q9BSH3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NICN1Q9BSH3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NICN1Q9BSH3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NICN1Q9BSH3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.01■□□□□ 0.47
NICN1Q9BSH3 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.01■□□□□ 0.47
NICN1Q9BSH3 AL512631.2-201ENST00000604634 923 ntBASIC18.01■□□□□ 0.47
NICN1Q9BSH3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NICN1Q9BSH3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18■□□□□ 0.47
NICN1Q9BSH3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18■□□□□ 0.47
NICN1Q9BSH3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NICN1Q9BSH3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18■□□□□ 0.47
NICN1Q9BSH3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NICN1Q9BSH3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18■□□□□ 0.47
NICN1Q9BSH3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms