Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.51■□□□□ 0.55
VRK1Q99986 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.51■□□□□ 0.55
VRK1Q99986 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VRK1Q99986 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VRK1Q99986 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VRK1Q99986 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VRK1Q99986 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VRK1Q99986 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.5■□□□□ 0.55
VRK1Q99986 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
VRK1Q99986 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.5■□□□□ 0.55
VRK1Q99986 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VRK1Q99986 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VRK1Q99986 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.5■□□□□ 0.55
VRK1Q99986 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.5■□□□□ 0.55
VRK1Q99986 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.5■□□□□ 0.55
VRK1Q99986 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
VRK1Q99986 SMUG1P1-201ENST00000590640 811 ntBASIC18.5■□□□□ 0.55
VRK1Q99986 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VRK1Q99986 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.5■□□□□ 0.55
VRK1Q99986 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VRK1Q99986 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VRK1Q99986 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VRK1Q99986 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.49■□□□□ 0.55
VRK1Q99986 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
VRK1Q99986 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VRK1Q99986 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.49■□□□□ 0.55
VRK1Q99986 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.49■□□□□ 0.55
VRK1Q99986 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VRK1Q99986 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.49■□□□□ 0.55
VRK1Q99986 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.49■□□□□ 0.55
VRK1Q99986 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 AC026310.3-201ENST00000625186 2373 ntBASIC18.49■□□□□ 0.55
VRK1Q99986 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VRK1Q99986 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VRK1Q99986 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.48■□□□□ 0.55
VRK1Q99986 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.48■□□□□ 0.55
VRK1Q99986 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VRK1Q99986 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.48■□□□□ 0.55
VRK1Q99986 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VRK1Q99986 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.48■□□□□ 0.55
VRK1Q99986 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
VRK1Q99986 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.48■□□□□ 0.55
VRK1Q99986 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.47■□□□□ 0.55
VRK1Q99986 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VRK1Q99986 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.47■□□□□ 0.55
VRK1Q99986 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
VRK1Q99986 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
VRK1Q99986 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VRK1Q99986 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VRK1Q99986 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
VRK1Q99986 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VRK1Q99986 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.47■□□□□ 0.55
VRK1Q99986 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.47■□□□□ 0.55
VRK1Q99986 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 LINC01960-201ENST00000563759 1884 ntBASIC18.47■□□□□ 0.55
VRK1Q99986 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VRK1Q99986 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VRK1Q99986 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
VRK1Q99986 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VRK1Q99986 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VRK1Q99986 AC139530.1-201ENST00000575312 1977 ntBASIC18.46■□□□□ 0.55
VRK1Q99986 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VRK1Q99986 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VRK1Q99986 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VRK1Q99986 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VRK1Q99986 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.46■□□□□ 0.55
VRK1Q99986 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms