Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
CPNE1Q99829 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE1Q99829 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CPNE1Q99829 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.06■□□□□ 0.96
CPNE1Q99829 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
CPNE1Q99829 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CPNE1Q99829 LINC01521-201ENST00000504184 1943 ntBASIC21.06■□□□□ 0.96
CPNE1Q99829 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 AC009237.3-201ENST00000393279 1427 ntBASIC21.06■□□□□ 0.96
CPNE1Q99829 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.06■□□□□ 0.96
CPNE1Q99829 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.06■□□□□ 0.96
CPNE1Q99829 AL136162.1-201ENST00000607711 1078 ntBASIC21.06■□□□□ 0.96
CPNE1Q99829 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.06■□□□□ 0.96
CPNE1Q99829 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CPNE1Q99829 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.06■□□□□ 0.96
CPNE1Q99829 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE1Q99829 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE1Q99829 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE1Q99829 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE1Q99829 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE1Q99829 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE1Q99829 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE1Q99829 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE1Q99829 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE1Q99829 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPNE1Q99829 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.05■□□□□ 0.96
CPNE1Q99829 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE1Q99829 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE1Q99829 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE1Q99829 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CPNE1Q99829 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CPNE1Q99829 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE1Q99829 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE1Q99829 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CPNE1Q99829 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CPNE1Q99829 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE1Q99829 AC135279.3-201ENST00000610945 1311 ntBASIC21.04■□□□□ 0.96
CPNE1Q99829 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CPNE1Q99829 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE1Q99829 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.04■□□□□ 0.96
CPNE1Q99829 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.04■□□□□ 0.96
CPNE1Q99829 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE1Q99829 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.04■□□□□ 0.96
CPNE1Q99829 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE1Q99829 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.04■□□□□ 0.96
CPNE1Q99829 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE1Q99829 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE1Q99829 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE1Q99829 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE1Q99829 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.03■□□□□ 0.96
CPNE1Q99829 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CPNE1Q99829 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE1Q99829 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.03■□□□□ 0.96
CPNE1Q99829 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.03■□□□□ 0.96
CPNE1Q99829 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE1Q99829 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.03■□□□□ 0.96
CPNE1Q99829 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE1Q99829 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE1Q99829 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE1Q99829 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CPNE1Q99829 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE1Q99829 AC073130.3-201ENST00000624389 2278 ntBASIC21.03■□□□□ 0.96
CPNE1Q99829 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CPNE1Q99829 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE1Q99829 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE1Q99829 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE1Q99829 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CPNE1Q99829 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.02■□□□□ 0.96
CPNE1Q99829 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CPNE1Q99829 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE1Q99829 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.02■□□□□ 0.96
CPNE1Q99829 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CPNE1Q99829 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE1Q99829 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CPNE1Q99829 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE1Q99829 AC055733.4-201ENST00000638462 1354 ntBASIC21.01■□□□□ 0.95
CPNE1Q99829 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE1Q99829 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.01■□□□□ 0.95
CPNE1Q99829 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE1Q99829 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE1Q99829 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE1Q99829 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.01■□□□□ 0.95
CPNE1Q99829 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE1Q99829 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE1Q99829 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE1Q99829 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE1Q99829 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPNE1Q99829 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms