Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 AC007322.1-201ENST00000426983 750 ntBASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 AC013268.1-206ENST00000638368 961 ntBASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 AC112229.1-201ENST00000639295 961 ntBASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.94■■□□□ 1.1
CDK5RAP1Q96SZ6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 AL117328.2-201ENST00000624617 1940 ntBASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP1Q96SZ6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 AC006970.2-201ENST00000450065 779 ntBASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 TERF1P5-201ENST00000477545 1207 ntBASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CDK5RAP1Q96SZ6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 AC061975.6-201ENST00000579045 1553 ntBASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 AC007322.4-201ENST00000509611 723 ntBASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 C11orf96-202ENST00000528572 1834 ntBASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK5RAP1Q96SZ6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK5RAP1Q96SZ6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.89■■□□□ 1.1
CDK5RAP1Q96SZ6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDK5RAP1Q96SZ6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.89■■□□□ 1.1
CDK5RAP1Q96SZ6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 AC243732.1-201ENST00000612648 864 ntBASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP1Q96SZ6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms