Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.98■■□□□ 1.59
NEK1Q96PY6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
NEK1Q96PY6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK1Q96PY6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK1Q96PY6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.98■■□□□ 1.59
NEK1Q96PY6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.97■■□□□ 1.59
NEK1Q96PY6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK1Q96PY6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK1Q96PY6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK1Q96PY6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK1Q96PY6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.97■■□□□ 1.59
NEK1Q96PY6 YBX1P1-201ENST00000445822 960 ntBASIC24.97■■□□□ 1.59
NEK1Q96PY6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.97■■□□□ 1.59
NEK1Q96PY6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.97■■□□□ 1.59
NEK1Q96PY6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK1Q96PY6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK1Q96PY6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NEK1Q96PY6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NEK1Q96PY6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
NEK1Q96PY6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
NEK1Q96PY6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
NEK1Q96PY6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NEK1Q96PY6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.96■■□□□ 1.59
NEK1Q96PY6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.96■■□□□ 1.59
NEK1Q96PY6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.96■■□□□ 1.59
NEK1Q96PY6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.96■■□□□ 1.59
NEK1Q96PY6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NEK1Q96PY6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NEK1Q96PY6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NEK1Q96PY6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
NEK1Q96PY6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
NEK1Q96PY6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
NEK1Q96PY6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
NEK1Q96PY6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NEK1Q96PY6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NEK1Q96PY6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.95■■□□□ 1.58
NEK1Q96PY6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NEK1Q96PY6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NEK1Q96PY6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.95■■□□□ 1.58
NEK1Q96PY6 RARRES2P6-201ENST00000567333 442 ntBASIC24.95■■□□□ 1.58
NEK1Q96PY6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.95■■□□□ 1.58
NEK1Q96PY6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.95■■□□□ 1.58
NEK1Q96PY6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.95■■□□□ 1.58
NEK1Q96PY6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
NEK1Q96PY6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
NEK1Q96PY6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NEK1Q96PY6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.95■■□□□ 1.58
NEK1Q96PY6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.94■■□□□ 1.58
NEK1Q96PY6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
NEK1Q96PY6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.94■■□□□ 1.58
NEK1Q96PY6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NEK1Q96PY6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NEK1Q96PY6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
NEK1Q96PY6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
NEK1Q96PY6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.94■■□□□ 1.58
NEK1Q96PY6 TERF1P2-201ENST00000583350 1212 ntBASIC24.94■■□□□ 1.58
NEK1Q96PY6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NEK1Q96PY6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NEK1Q96PY6 KRT87P-202ENST00000534226 1464 ntBASIC24.94■■□□□ 1.58
NEK1Q96PY6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.94■■□□□ 1.58
NEK1Q96PY6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.94■■□□□ 1.58
NEK1Q96PY6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
NEK1Q96PY6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NEK1Q96PY6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.93■■□□□ 1.58
NEK1Q96PY6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
NEK1Q96PY6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NEK1Q96PY6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NEK1Q96PY6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.93■■□□□ 1.58
NEK1Q96PY6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NEK1Q96PY6 AC092666.2-201ENST00000613287 246 ntBASIC24.93■■□□□ 1.58
NEK1Q96PY6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.93■■□□□ 1.58
NEK1Q96PY6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NEK1Q96PY6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NEK1Q96PY6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NEK1Q96PY6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.92■■□□□ 1.58
NEK1Q96PY6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NEK1Q96PY6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NEK1Q96PY6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.92■■□□□ 1.58
NEK1Q96PY6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NEK1Q96PY6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.92■■□□□ 1.58
NEK1Q96PY6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.92■■□□□ 1.58
NEK1Q96PY6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.92■■□□□ 1.58
NEK1Q96PY6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
NEK1Q96PY6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
NEK1Q96PY6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NEK1Q96PY6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NEK1Q96PY6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NEK1Q96PY6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NEK1Q96PY6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.91■■□□□ 1.58
NEK1Q96PY6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NEK1Q96PY6 CCDC92B-201ENST00000575506 885 ntBASIC24.91■■□□□ 1.58
NEK1Q96PY6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.91■■□□□ 1.58
NEK1Q96PY6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NEK1Q96PY6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NEK1Q96PY6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
NEK1Q96PY6 AL049796.1-201ENST00000565336 1766 ntBASIC24.9■■□□□ 1.58
NEK1Q96PY6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.9■■□□□ 1.58
NEK1Q96PY6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NEK1Q96PY6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NEK1Q96PY6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms