Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 DUSP5P2-201ENST00000426873 1033 ntBASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 AC097658.1-201ENST00000475555 843 ntBASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC46A1Q96NT5 AC137767.1-201ENST00000602918 1920 ntBASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 RARRES2P4-201ENST00000514074 484 ntBASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 AC083880.1-201ENST00000608266 535 ntBASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 MYC-209ENST00000641252 345 ntBASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC46A1Q96NT5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 AC098590.1-201ENST00000468126 897 ntBASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 AC120498.10-201ENST00000621827 505 ntBASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 AC233723.2-201ENST00000623798 2106 ntBASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SLC46A1Q96NT5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 ESRRAP1-201ENST00000400596 1257 ntBASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 LINC00526-201ENST00000581067 1875 ntBASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 AP006587.3-201ENST00000525742 1516 ntBASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
SLC46A1Q96NT5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 GCSHP5-201ENST00000443090 522 ntBASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC46A1Q96NT5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms