Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CALR3Q96L12 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 AC131281.2-201ENST00000520478 145 ntBASIC22.26■■□□□ 1.15
CALR3Q96L12 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.26■■□□□ 1.15
CALR3Q96L12 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.26■■□□□ 1.15
CALR3Q96L12 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.26■■□□□ 1.15
CALR3Q96L12 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.26■■□□□ 1.15
CALR3Q96L12 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CALR3Q96L12 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
CALR3Q96L12 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CALR3Q96L12 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CALR3Q96L12 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CALR3Q96L12 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CALR3Q96L12 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CALR3Q96L12 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CALR3Q96L12 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.25■■□□□ 1.15
CALR3Q96L12 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.25■■□□□ 1.15
CALR3Q96L12 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.25■■□□□ 1.15
CALR3Q96L12 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CALR3Q96L12 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CALR3Q96L12 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CALR3Q96L12 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.24■■□□□ 1.15
CALR3Q96L12 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CALR3Q96L12 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CALR3Q96L12 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CALR3Q96L12 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CALR3Q96L12 AC233992.3-201ENST00000607491 485 ntBASIC22.24■■□□□ 1.15
CALR3Q96L12 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CALR3Q96L12 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CALR3Q96L12 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CALR3Q96L12 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CALR3Q96L12 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CALR3Q96L12 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.23■■□□□ 1.15
CALR3Q96L12 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CALR3Q96L12 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CALR3Q96L12 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CALR3Q96L12 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CALR3Q96L12 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CALR3Q96L12 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CALR3Q96L12 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CALR3Q96L12 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CALR3Q96L12 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CALR3Q96L12 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.22■■□□□ 1.15
CALR3Q96L12 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.22■■□□□ 1.15
CALR3Q96L12 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.22■■□□□ 1.15
CALR3Q96L12 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.22■■□□□ 1.15
CALR3Q96L12 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.22■■□□□ 1.15
CALR3Q96L12 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.22■■□□□ 1.15
CALR3Q96L12 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.22■■□□□ 1.15
CALR3Q96L12 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.22■■□□□ 1.15
CALR3Q96L12 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CALR3Q96L12 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.22■■□□□ 1.15
CALR3Q96L12 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.22■■□□□ 1.15
CALR3Q96L12 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.22■■□□□ 1.15
CALR3Q96L12 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CALR3Q96L12 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CALR3Q96L12 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CALR3Q96L12 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.21■■□□□ 1.15
CALR3Q96L12 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CALR3Q96L12 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
CALR3Q96L12 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CALR3Q96L12 FEM1AP1-201ENST00000431297 1995 ntBASIC22.21■■□□□ 1.15
CALR3Q96L12 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CALR3Q96L12 LINC01006-201ENST00000333319 2292 ntBASIC22.2■■□□□ 1.15
CALR3Q96L12 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CALR3Q96L12 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CALR3Q96L12 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CALR3Q96L12 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CALR3Q96L12 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CALR3Q96L12 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CALR3Q96L12 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CALR3Q96L12 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CALR3Q96L12 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.19■■□□□ 1.14
CALR3Q96L12 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CALR3Q96L12 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.19■■□□□ 1.14
CALR3Q96L12 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.19■■□□□ 1.14
CALR3Q96L12 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CALR3Q96L12 IGHV3-19-201ENST00000521488 291 ntBASIC22.19■■□□□ 1.14
CALR3Q96L12 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms