Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 FAM201B-201ENST00000458407 597 ntBASIC21.18■□□□□ 0.98
SIPA1Q96FS4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIPA1Q96FS4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 BX276092.2-201ENST00000417668 665 ntBASIC21.16■□□□□ 0.98
SIPA1Q96FS4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 AL162412.1-201ENST00000567129 965 ntBASIC21.16■□□□□ 0.98
SIPA1Q96FS4 AC243732.1-201ENST00000612648 864 ntBASIC21.16■□□□□ 0.98
SIPA1Q96FS4 AC092118.2-201ENST00000613495 667 ntBASIC21.16■□□□□ 0.98
SIPA1Q96FS4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.16■□□□□ 0.98
SIPA1Q96FS4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.15■□□□□ 0.98
SIPA1Q96FS4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
SIPA1Q96FS4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIPA1Q96FS4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SIPA1Q96FS4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIPA1Q96FS4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIPA1Q96FS4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIPA1Q96FS4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIPA1Q96FS4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.14■□□□□ 0.98
SIPA1Q96FS4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 RNA5SP413-201ENST00000516373 109 ntBASIC21.14■□□□□ 0.97
SIPA1Q96FS4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SIPA1Q96FS4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.13■□□□□ 0.97
SIPA1Q96FS4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.12■□□□□ 0.97
SIPA1Q96FS4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SIPA1Q96FS4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SIPA1Q96FS4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.12■□□□□ 0.97
SIPA1Q96FS4 RARRES2P4-201ENST00000514074 484 ntBASIC21.12■□□□□ 0.97
SIPA1Q96FS4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SIPA1Q96FS4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.12■□□□□ 0.97
SIPA1Q96FS4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms