Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX11Q96FC9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
DDX11Q96FC9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX11Q96FC9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25■■□□□ 1.59
DDX11Q96FC9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25■■□□□ 1.59
DDX11Q96FC9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX11Q96FC9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25■■□□□ 1.59
DDX11Q96FC9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25■■□□□ 1.59
DDX11Q96FC9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25■■□□□ 1.59
DDX11Q96FC9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX11Q96FC9 AC004854.2-201ENST00000608450 1441 ntBASIC25■■□□□ 1.59
DDX11Q96FC9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC25■■□□□ 1.59
DDX11Q96FC9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25■■□□□ 1.59
DDX11Q96FC9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
DDX11Q96FC9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.99■■□□□ 1.59
DDX11Q96FC9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.99■■□□□ 1.59
DDX11Q96FC9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.99■■□□□ 1.59
DDX11Q96FC9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX11Q96FC9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
DDX11Q96FC9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.99■■□□□ 1.59
DDX11Q96FC9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.99■■□□□ 1.59
DDX11Q96FC9 AC244015.2-201ENST00000616358 1861 ntBASIC24.99■■□□□ 1.59
DDX11Q96FC9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
DDX11Q96FC9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX11Q96FC9 AP004607.7-201ENST00000527152 1677 ntBASIC24.98■■□□□ 1.59
DDX11Q96FC9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX11Q96FC9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX11Q96FC9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX11Q96FC9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX11Q96FC9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.98■■□□□ 1.59
DDX11Q96FC9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.98■■□□□ 1.59
DDX11Q96FC9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX11Q96FC9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX11Q96FC9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
DDX11Q96FC9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX11Q96FC9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.97■■□□□ 1.59
DDX11Q96FC9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.97■■□□□ 1.59
DDX11Q96FC9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
DDX11Q96FC9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX11Q96FC9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.97■■□□□ 1.59
DDX11Q96FC9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX11Q96FC9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX11Q96FC9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
DDX11Q96FC9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX11Q96FC9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX11Q96FC9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX11Q96FC9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.96■■□□□ 1.59
DDX11Q96FC9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
DDX11Q96FC9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX11Q96FC9 KRT19P1-201ENST00000405746 1186 ntBASIC24.96■■□□□ 1.59
DDX11Q96FC9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.96■■□□□ 1.59
DDX11Q96FC9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.96■■□□□ 1.59
DDX11Q96FC9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX11Q96FC9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DDX11Q96FC9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX11Q96FC9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
DDX11Q96FC9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
DDX11Q96FC9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
DDX11Q96FC9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
DDX11Q96FC9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.95■■□□□ 1.59
DDX11Q96FC9 PKD1P6-201ENST00000343738 4769 ntBASIC24.95■■□□□ 1.59
DDX11Q96FC9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX11Q96FC9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX11Q96FC9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.95■■□□□ 1.58
DDX11Q96FC9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.95■■□□□ 1.58
DDX11Q96FC9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.95■■□□□ 1.58
DDX11Q96FC9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.95■■□□□ 1.58
DDX11Q96FC9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.95■■□□□ 1.58
DDX11Q96FC9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.95■■□□□ 1.58
DDX11Q96FC9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX11Q96FC9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX11Q96FC9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX11Q96FC9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX11Q96FC9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
DDX11Q96FC9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX11Q96FC9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX11Q96FC9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
DDX11Q96FC9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX11Q96FC9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX11Q96FC9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.94■■□□□ 1.58
DDX11Q96FC9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.94■■□□□ 1.58
DDX11Q96FC9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX11Q96FC9 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.93■■□□□ 1.58
DDX11Q96FC9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX11Q96FC9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
DDX11Q96FC9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.93■■□□□ 1.58
DDX11Q96FC9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX11Q96FC9 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.93■■□□□ 1.58
DDX11Q96FC9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX11Q96FC9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX11Q96FC9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
DDX11Q96FC9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms