Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 LSM12P1-201ENST00000411836 588 ntBASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 AP003097.1-201ENST00000530657 1135 ntBASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 AC073648.6-201ENST00000641589 218 ntBASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 AC093323.1-202ENST00000635031 2045 ntBASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.04■□□□□ 0.64
SNRNP40Q96DI7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 AC137767.1-201ENST00000602918 1920 ntBASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SNRNP40Q96DI7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 AC061975.6-201ENST00000579045 1553 ntBASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP40Q96DI7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.02■□□□□ 0.63
SNRNP40Q96DI7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SNRNP40Q96DI7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SNRNP40Q96DI7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP40Q96DI7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SNRNP40Q96DI7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19■□□□□ 0.63
SNRNP40Q96DI7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP40Q96DI7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19■□□□□ 0.63
SNRNP40Q96DI7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19■□□□□ 0.63
SNRNP40Q96DI7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNRNP40Q96DI7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19■□□□□ 0.63
SNRNP40Q96DI7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNRNP40Q96DI7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19■□□□□ 0.63
SNRNP40Q96DI7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19■□□□□ 0.63
SNRNP40Q96DI7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNRNP40Q96DI7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 AC008550.1-201ENST00000511500 884 ntBASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.99■□□□□ 0.63
SNRNP40Q96DI7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms