Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 AC104187.1-201ENST00000607510 612 ntBASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTHRC1Q96CG8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 AC010141.2-201ENST00000452426 721 ntBASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 FEM1AP4-201ENST00000443167 1987 ntBASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTHRC1Q96CG8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.61■□□□□ 0.73
CTHRC1Q96CG8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 POU5F1P4-201ENST00000413175 1085 ntBASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTHRC1Q96CG8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 AL024507.2-201ENST00000606070 2574 ntBASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 AC061975.6-201ENST00000579045 1553 ntBASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 NTF6G-201ENST00000591094 616 ntBASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 AC008175.2-201ENST00000612840 297 ntBASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTHRC1Q96CG8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTHRC1Q96CG8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTHRC1Q96CG8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTHRC1Q96CG8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTHRC1Q96CG8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTHRC1Q96CG8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTHRC1Q96CG8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTHRC1Q96CG8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTHRC1Q96CG8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTHRC1Q96CG8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.58■□□□□ 0.72
CTHRC1Q96CG8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.58■□□□□ 0.72
CTHRC1Q96CG8 AP001160.3-201ENST00000601484 763 ntBASIC19.58■□□□□ 0.72
CTHRC1Q96CG8 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.58■□□□□ 0.72
CTHRC1Q96CG8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTHRC1Q96CG8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.58■□□□□ 0.72
CTHRC1Q96CG8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CTHRC1Q96CG8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTHRC1Q96CG8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTHRC1Q96CG8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.57■□□□□ 0.72
CTHRC1Q96CG8 KRT19P1-201ENST00000405746 1186 ntBASIC19.57■□□□□ 0.72
CTHRC1Q96CG8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.57■□□□□ 0.72
CTHRC1Q96CG8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTHRC1Q96CG8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.57■□□□□ 0.72
CTHRC1Q96CG8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms