Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.68■□□□□ 0.58
APH1AQ96BI3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
APH1AQ96BI3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.67■□□□□ 0.58
APH1AQ96BI3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 KRT18P20-201ENST00000548986 1279 ntBASIC18.67■□□□□ 0.58
APH1AQ96BI3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.67■□□□□ 0.58
APH1AQ96BI3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APH1AQ96BI3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APH1AQ96BI3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
APH1AQ96BI3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APH1AQ96BI3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.66■□□□□ 0.58
APH1AQ96BI3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.66■□□□□ 0.58
APH1AQ96BI3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APH1AQ96BI3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APH1AQ96BI3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APH1AQ96BI3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APH1AQ96BI3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APH1AQ96BI3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APH1AQ96BI3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 AC006015.1-201ENST00000429970 570 ntBASIC18.65■□□□□ 0.58
APH1AQ96BI3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APH1AQ96BI3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APH1AQ96BI3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APH1AQ96BI3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.65■□□□□ 0.58
APH1AQ96BI3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
APH1AQ96BI3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
APH1AQ96BI3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 UBE2DNL-204ENST00000602536 740 ntBASIC18.64■□□□□ 0.57
APH1AQ96BI3 AC092437.1-201ENST00000624794 1048 ntBASIC18.64■□□□□ 0.57
APH1AQ96BI3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APH1AQ96BI3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
APH1AQ96BI3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.63■□□□□ 0.57
APH1AQ96BI3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.63■□□□□ 0.57
APH1AQ96BI3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APH1AQ96BI3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms