Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 AL020996.1-203ENST00000536896 2307 ntBASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 DUX4L18-201ENST00000553347 1267 ntBASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 PVT1_1.1-201ENST00000615125 194 ntBASIC18.02■□□□□ 0.48
SMIM4Q8WVI0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM4Q8WVI0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM4Q8WVI0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM4Q8WVI0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM4Q8WVI0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM4Q8WVI0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM4Q8WVI0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 AC074183.2-201ENST00000623112 922 ntBASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 AC020907.5-201ENST00000624372 1936 ntBASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM4Q8WVI0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM4Q8WVI0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM4Q8WVI0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM4Q8WVI0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMIM4Q8WVI0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 BHLHE23-202ENST00000612929 1109 ntBASIC18■□□□□ 0.47
SMIM4Q8WVI0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM4Q8WVI0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMIM4Q8WVI0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM4Q8WVI0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM4Q8WVI0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SMIM4Q8WVI0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.99■□□□□ 0.47
SMIM4Q8WVI0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms