Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRPM4Q8TD43 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.26■■□□□ 1.63
TRPM4Q8TD43 HLA-B-256ENST00000639848 1089 ntBASIC25.26■■□□□ 1.63
TRPM4Q8TD43 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRPM4Q8TD43 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRPM4Q8TD43 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.26■■□□□ 1.63
TRPM4Q8TD43 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 SNORA78-201ENST00000459373 127 ntBASIC25.25■■□□□ 1.63
TRPM4Q8TD43 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 CYP2T3P-201ENST00000601990 817 ntBASIC25.25■■□□□ 1.63
TRPM4Q8TD43 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRPM4Q8TD43 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.24■■□□□ 1.63
TRPM4Q8TD43 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
TRPM4Q8TD43 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.22■■□□□ 1.63
TRPM4Q8TD43 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRPM4Q8TD43 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRPM4Q8TD43 PNMA6B-201ENST00000538162 1200 ntBASIC25.21■■□□□ 1.63
TRPM4Q8TD43 RN7SL471P-201ENST00000580476 299 ntBASIC25.21■■□□□ 1.63
TRPM4Q8TD43 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.21■■□□□ 1.63
TRPM4Q8TD43 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.21■■□□□ 1.63
TRPM4Q8TD43 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRPM4Q8TD43 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRPM4Q8TD43 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
TRPM4Q8TD43 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.2■■□□□ 1.63
TRPM4Q8TD43 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
TRPM4Q8TD43 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
TRPM4Q8TD43 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRPM4Q8TD43 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.2■■□□□ 1.62
TRPM4Q8TD43 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRPM4Q8TD43 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.2■■□□□ 1.62
TRPM4Q8TD43 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRPM4Q8TD43 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.2■■□□□ 1.62
TRPM4Q8TD43 AC137767.1-201ENST00000602918 1920 ntBASIC25.2■■□□□ 1.62
TRPM4Q8TD43 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 AC010331.1-201ENST00000611423 582 ntBASIC25.19■■□□□ 1.62
TRPM4Q8TD43 REXO1L12P-201ENST00000622156 912 ntBASIC25.19■■□□□ 1.62
TRPM4Q8TD43 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.19■■□□□ 1.62
TRPM4Q8TD43 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRPM4Q8TD43 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.18■■□□□ 1.62
TRPM4Q8TD43 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms