Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCHCR1Q8TD31 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
CCHCR1Q8TD31 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCHCR1Q8TD31 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCHCR1Q8TD31 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CCHCR1Q8TD31 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CCHCR1Q8TD31 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCHCR1Q8TD31 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 IGHV3-19-201ENST00000521488 291 ntBASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCHCR1Q8TD31 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCHCR1Q8TD31 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 AP004607.7-201ENST00000527152 1677 ntBASIC21.85■■□□□ 1.09
CCHCR1Q8TD31 TSPY26P-201ENST00000476365 1326 ntBASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCHCR1Q8TD31 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCHCR1Q8TD31 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCHCR1Q8TD31 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms