Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDH19Q8TAB3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 AL162430.1-201ENST00000480705 870 ntBASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH19Q8TAB3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 EEF1DP3-203ENST00000566025 782 ntBASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH19Q8TAB3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH19Q8TAB3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH19Q8TAB3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH19Q8TAB3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 AC053503.5-201ENST00000601508 636 ntBASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.74■■□□□ 1.07
PCDH19Q8TAB3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 AL049796.1-201ENST00000565336 1766 ntBASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms