Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 AC092028.1-203ENST00000608262 953 ntBASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD2Q8NHY2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 MTDHP2-201ENST00000601468 714 ntBASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD2Q8NHY2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD2Q8NHY2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFWD2Q8NHY2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFWD2Q8NHY2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RFWD2Q8NHY2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RFWD2Q8NHY2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD2Q8NHY2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 AC006128.1-201ENST00000624704 1661 ntBASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms