Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 AC096631.2-201ENST00000436136 790 ntBASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 AC135279.3-201ENST00000610945 1311 ntBASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 AC024257.2-201ENST00000549699 147 ntBASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 MIR4767-201ENST00000582827 78 ntBASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM116Q8NCL8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM116Q8NCL8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 PBX2P1-201ENST00000493219 1291 ntBASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 AP006587.3-201ENST00000525742 1516 ntBASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM116Q8NCL8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM116Q8NCL8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.58■□□□□ 0.25
TMEM116Q8NCL8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms