Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 MIR4787-201ENST00000607364 84 ntBASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 pRNA.6-201ENST00000610482 90 ntBASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 pRNA.5-201ENST00000612139 90 ntBASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 pRNA.11-201ENST00000618423 90 ntBASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 pRNA.13-201ENST00000619112 90 ntBASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71LQ8N9Z2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 AC010141.3-201ENST00000456659 717 ntBASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC71LQ8N9Z2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 GABARAPL3-202ENST00000624044 1851 ntBASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms