Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
ARHGEF28Q8N1W1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ARHGEF28Q8N1W1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
ARHGEF28Q8N1W1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 AC091874.3-201ENST00000512672 1195 ntBASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 TMEM191A-211ENST00000637163 1067 ntBASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC29.48■■■□□ 2.31
ARHGEF28Q8N1W1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
ARHGEF28Q8N1W1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ARHGEF28Q8N1W1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ARHGEF28Q8N1W1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC29.47■■■□□ 2.31
ARHGEF28Q8N1W1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC29.47■■■□□ 2.31
ARHGEF28Q8N1W1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC29.47■■■□□ 2.31
ARHGEF28Q8N1W1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC29.47■■■□□ 2.31
ARHGEF28Q8N1W1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC29.47■■■□□ 2.31
ARHGEF28Q8N1W1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 POU5F1P3-201ENST00000428824 1078 ntBASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
ARHGEF28Q8N1W1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 AC098590.1-201ENST00000468126 897 ntBASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC29.45■■■□□ 2.31
ARHGEF28Q8N1W1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.3
ARHGEF28Q8N1W1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.3
ARHGEF28Q8N1W1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
ARHGEF28Q8N1W1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
ARHGEF28Q8N1W1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 ITM2C-210ENST00000620962 501 ntBASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ARHGEF28Q8N1W1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 AL591742.1-201ENST00000604433 565 ntBASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 AC008694.1-202ENST00000636953 945 ntBASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 AC066615.1-201ENST00000640911 628 ntBASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ARHGEF28Q8N1W1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
ARHGEF28Q8N1W1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms