Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 AC011298.3-201ENST00000615796 283 ntBASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 AC136469.2-201ENST00000623944 1028 ntBASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01561Q8N1V8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 SYT6-210ENST00000641643 1587 ntBASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01561Q8N1V8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms