Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.65■■□□□ 1.06
SIX5Q8N196 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.65■■□□□ 1.06
SIX5Q8N196 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.65■■□□□ 1.06
SIX5Q8N196 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.65■■□□□ 1.06
SIX5Q8N196 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SIX5Q8N196 FAM197Y4-202ENST00000622692 608 ntBASIC21.65■■□□□ 1.06
SIX5Q8N196 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SIX5Q8N196 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SIX5Q8N196 AC020928.2-201ENST00000588717 2197 ntBASIC21.64■■□□□ 1.06
SIX5Q8N196 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIX5Q8N196 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIX5Q8N196 POU5F1P4-201ENST00000413175 1085 ntBASIC21.64■■□□□ 1.05
SIX5Q8N196 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIX5Q8N196 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
SIX5Q8N196 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.64■■□□□ 1.05
SIX5Q8N196 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.64■■□□□ 1.05
SIX5Q8N196 MIR4497-201ENST00000583208 89 ntBASIC21.64■■□□□ 1.05
SIX5Q8N196 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SIX5Q8N196 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SIX5Q8N196 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIX5Q8N196 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.64■■□□□ 1.05
SIX5Q8N196 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SIX5Q8N196 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SIX5Q8N196 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIX5Q8N196 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX5Q8N196 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX5Q8N196 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.63■■□□□ 1.05
SIX5Q8N196 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX5Q8N196 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SIX5Q8N196 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SIX5Q8N196 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.63■■□□□ 1.05
SIX5Q8N196 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.63■■□□□ 1.05
SIX5Q8N196 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.63■■□□□ 1.05
SIX5Q8N196 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.63■■□□□ 1.05
SIX5Q8N196 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.63■■□□□ 1.05
SIX5Q8N196 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX5Q8N196 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.63■■□□□ 1.05
SIX5Q8N196 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.63■■□□□ 1.05
SIX5Q8N196 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SIX5Q8N196 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIX5Q8N196 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
SIX5Q8N196 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX5Q8N196 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX5Q8N196 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
SIX5Q8N196 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX5Q8N196 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIX5Q8N196 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.62■■□□□ 1.05
SIX5Q8N196 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.62■■□□□ 1.05
SIX5Q8N196 FAM210CP-201ENST00000445714 574 ntBASIC21.62■■□□□ 1.05
SIX5Q8N196 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIX5Q8N196 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.62■■□□□ 1.05
SIX5Q8N196 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SIX5Q8N196 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIX5Q8N196 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.61■■□□□ 1.05
SIX5Q8N196 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX5Q8N196 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SIX5Q8N196 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX5Q8N196 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIX5Q8N196 LINC00526-201ENST00000581067 1875 ntBASIC21.61■■□□□ 1.05
SIX5Q8N196 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SIX5Q8N196 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SIX5Q8N196 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.61■■□□□ 1.05
SIX5Q8N196 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.61■■□□□ 1.05
SIX5Q8N196 AC008403.3-201ENST00000598924 454 ntBASIC21.61■■□□□ 1.05
SIX5Q8N196 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.61■■□□□ 1.05
SIX5Q8N196 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.61■■□□□ 1.05
SIX5Q8N196 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.61■■□□□ 1.05
SIX5Q8N196 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SIX5Q8N196 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.6■■□□□ 1.05
SIX5Q8N196 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.6■■□□□ 1.05
SIX5Q8N196 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.6■■□□□ 1.05
SIX5Q8N196 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 RPPH1-201ENST00000516869 333 ntBASIC21.6■■□□□ 1.05
SIX5Q8N196 C1QBPP2-201ENST00000528754 825 ntBASIC21.6■■□□□ 1.05
SIX5Q8N196 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.6■■□□□ 1.05
SIX5Q8N196 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIX5Q8N196 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms