Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 AC135279.3-201ENST00000610945 1311 ntBASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 FEM1AP1-201ENST00000431297 1995 ntBASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 AC024257.2-201ENST00000549699 147 ntBASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 DUX4L19-201ENST00000557448 1267 ntBASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CRLF3Q8IUI8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 AC099791.2-201ENST00000605725 427 ntBASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.95■□□□□ 0.94
CRLF3Q8IUI8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 AC092171.4-201ENST00000609130 632 ntBASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
CRLF3Q8IUI8 SYT6-210ENST00000641643 1587 ntBASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 AL049796.1-201ENST00000565336 1766 ntBASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRLF3Q8IUI8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.92■□□□□ 0.94
CRLF3Q8IUI8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms