Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.05■□□□□ 0.8
RAB43Q86YS6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB43Q86YS6 AP001160.3-201ENST00000601484 763 ntBASIC20.05■□□□□ 0.8
RAB43Q86YS6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB43Q86YS6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RAB43Q86YS6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 AL109923.1-201ENST00000618799 583 ntBASIC20.04■□□□□ 0.8
RAB43Q86YS6 AC231657.2-201ENST00000624556 255 ntBASIC20.04■□□□□ 0.8
RAB43Q86YS6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB43Q86YS6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB43Q86YS6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RAB43Q86YS6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB43Q86YS6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB43Q86YS6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB43Q86YS6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB43Q86YS6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.03■□□□□ 0.8
RAB43Q86YS6 UBE2DNL-204ENST00000602536 740 ntBASIC20.03■□□□□ 0.8
RAB43Q86YS6 AC104771.1-201ENST00000603335 964 ntBASIC20.03■□□□□ 0.8
RAB43Q86YS6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB43Q86YS6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAB43Q86YS6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB43Q86YS6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB43Q86YS6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB43Q86YS6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB43Q86YS6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB43Q86YS6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB43Q86YS6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB43Q86YS6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RAB43Q86YS6 NCF1B-203ENST00000435988 1254 ntBASIC20.02■□□□□ 0.8
RAB43Q86YS6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB43Q86YS6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB43Q86YS6 MYCNOS-205ENST00000641950 531 ntBASIC20.02■□□□□ 0.8
RAB43Q86YS6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB43Q86YS6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB43Q86YS6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB43Q86YS6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB43Q86YS6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB43Q86YS6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB43Q86YS6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB43Q86YS6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB43Q86YS6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB43Q86YS6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB43Q86YS6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB43Q86YS6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB43Q86YS6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAB43Q86YS6 GPX1P1-201ENST00000388829 606 ntBASIC20.01■□□□□ 0.79
RAB43Q86YS6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RAB43Q86YS6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB43Q86YS6 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.01■□□□□ 0.79
RAB43Q86YS6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB43Q86YS6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB43Q86YS6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB43Q86YS6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB43Q86YS6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB43Q86YS6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB43Q86YS6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB43Q86YS6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB43Q86YS6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RAB43Q86YS6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB43Q86YS6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB43Q86YS6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB43Q86YS6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RAB43Q86YS6 AL355802.2-201ENST00000402069 882 ntBASIC20■□□□□ 0.79
RAB43Q86YS6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20■□□□□ 0.79
RAB43Q86YS6 AC007322.1-201ENST00000426983 750 ntBASIC20■□□□□ 0.79
RAB43Q86YS6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20■□□□□ 0.79
RAB43Q86YS6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20■□□□□ 0.79
RAB43Q86YS6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RAB43Q86YS6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20■□□□□ 0.79
RAB43Q86YS6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB43Q86YS6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB43Q86YS6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms