Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 GPX1P1-201ENST00000388829 606 ntBASIC22.32■■□□□ 1.16
LRRTM3Q86VH5 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.32■■□□□ 1.16
LRRTM3Q86VH5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRTM3Q86VH5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRTM3Q86VH5 AC120498.10-201ENST00000621827 505 ntBASIC22.32■■□□□ 1.16
LRRTM3Q86VH5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRTM3Q86VH5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRTM3Q86VH5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 KRT16P2-201ENST00000414673 1423 ntBASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 AC068338.2-201ENST00000563278 1430 ntBASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 AC013268.1-206ENST00000638368 961 ntBASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 AC112229.1-201ENST00000639295 961 ntBASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
LRRTM3Q86VH5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 AL121832.2-201ENST00000610979 668 ntBASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM3Q86VH5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 C11orf96-202ENST00000528572 1834 ntBASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 GUSBP6-202ENST00000438529 1198 ntBASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 RBM17P2-201ENST00000616397 1405 ntBASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM3Q86VH5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRTM3Q86VH5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 TSPY6P-201ENST00000448518 926 ntBASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 AC007322.4-201ENST00000509611 723 ntBASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
LRRTM3Q86VH5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.27■■□□□ 1.15
LRRTM3Q86VH5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LRRTM3Q86VH5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRTM3Q86VH5 AL355802.2-201ENST00000402069 882 ntBASIC22.25■■□□□ 1.15
LRRTM3Q86VH5 AC133552.2-202ENST00000575694 574 ntBASIC22.25■■□□□ 1.15
LRRTM3Q86VH5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms