Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 AC010525.1-201ENST00000585559 441 ntBASIC19.34■□□□□ 0.69
TUBA1AQ71U36 AL031432.3-201ENST00000607698 485 ntBASIC19.34■□□□□ 0.69
TUBA1AQ71U36 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TUBA1AQ71U36 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TUBA1AQ71U36 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.33■□□□□ 0.69
TUBA1AQ71U36 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TUBA1AQ71U36 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.33■□□□□ 0.69
TUBA1AQ71U36 AF213884.3-201ENST00000563833 479 ntBASIC19.33■□□□□ 0.68
TUBA1AQ71U36 AC008764.7-201ENST00000593779 1081 ntBASIC19.33■□□□□ 0.68
TUBA1AQ71U36 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TUBA1AQ71U36 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
TUBA1AQ71U36 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TUBA1AQ71U36 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 AC142381.2-201ENST00000566120 298 ntBASIC19.32■□□□□ 0.68
TUBA1AQ71U36 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBA1AQ71U36 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 EDA-201ENST00000338901 1233 ntBASIC19.31■□□□□ 0.68
TUBA1AQ71U36 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 SLC47A1P1-202ENST00000449666 945 ntBASIC19.31■□□□□ 0.68
TUBA1AQ71U36 AP001330.3-201ENST00000520123 633 ntBASIC19.31■□□□□ 0.68
TUBA1AQ71U36 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 AL355001.2-201ENST00000620617 1191 ntBASIC19.31■□□□□ 0.68
TUBA1AQ71U36 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1AQ71U36 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1AQ71U36 FEM1AP1-201ENST00000431297 1995 ntBASIC19.3■□□□□ 0.68
TUBA1AQ71U36 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 AC133561.4-201ENST00000566112 224 ntBASIC19.29■□□□□ 0.68
TUBA1AQ71U36 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TUBA1AQ71U36 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms