Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
RAPH1Q70E73 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.1■□□□□ 0.97
RAPH1Q70E73 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RAPH1Q70E73 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.1■□□□□ 0.97
RAPH1Q70E73 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPH1Q70E73 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RAPH1Q70E73 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPH1Q70E73 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPH1Q70E73 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPH1Q70E73 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPH1Q70E73 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.09■□□□□ 0.97
RAPH1Q70E73 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPH1Q70E73 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPH1Q70E73 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RAPH1Q70E73 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPH1Q70E73 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.08■□□□□ 0.97
RAPH1Q70E73 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPH1Q70E73 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.08■□□□□ 0.97
RAPH1Q70E73 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPH1Q70E73 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPH1Q70E73 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAPH1Q70E73 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPH1Q70E73 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPH1Q70E73 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RAPH1Q70E73 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.08■□□□□ 0.97
RAPH1Q70E73 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RAPH1Q70E73 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPH1Q70E73 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPH1Q70E73 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.07■□□□□ 0.96
RAPH1Q70E73 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.07■□□□□ 0.96
RAPH1Q70E73 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RAPH1Q70E73 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.07■□□□□ 0.96
RAPH1Q70E73 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPH1Q70E73 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPH1Q70E73 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPH1Q70E73 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPH1Q70E73 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPH1Q70E73 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPH1Q70E73 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPH1Q70E73 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPH1Q70E73 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPH1Q70E73 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 RNF165-205ENST00000588679 2904 ntBASIC21.06■□□□□ 0.96
RAPH1Q70E73 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPH1Q70E73 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPH1Q70E73 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPH1Q70E73 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RAPH1Q70E73 AP006587.3-201ENST00000525742 1516 ntBASIC21.05■□□□□ 0.96
RAPH1Q70E73 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPH1Q70E73 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPH1Q70E73 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.05■□□□□ 0.96
RAPH1Q70E73 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.05■□□□□ 0.96
RAPH1Q70E73 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAPH1Q70E73 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPH1Q70E73 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPH1Q70E73 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
RAPH1Q70E73 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RAPH1Q70E73 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPH1Q70E73 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPH1Q70E73 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
RAPH1Q70E73 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms