Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.05■□□□□ 0.32
C9orf139Q6ZV77 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
C9orf139Q6ZV77 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf139Q6ZV77 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.05■□□□□ 0.32
C9orf139Q6ZV77 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf139Q6ZV77 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf139Q6ZV77 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 RBM17P2-201ENST00000616397 1405 ntBASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf139Q6ZV77 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 MKRN4P-201ENST00000444706 1521 ntBASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf139Q6ZV77 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 AC092118.2-201ENST00000613495 667 ntBASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 TMEM191A-211ENST00000637163 1067 ntBASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.02■□□□□ 0.32
C9orf139Q6ZV77 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
C9orf139Q6ZV77 C9orf163-202ENST00000624034 2573 ntBASIC17.02■□□□□ 0.31
C9orf139Q6ZV77 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.02■□□□□ 0.31
C9orf139Q6ZV77 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.02■□□□□ 0.31
C9orf139Q6ZV77 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
C9orf139Q6ZV77 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
C9orf139Q6ZV77 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 AC092053.2-201ENST00000640557 1818 ntBASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 MIPEPP3-201ENST00000412105 444 ntBASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 AL591742.1-201ENST00000604433 565 ntBASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf139Q6ZV77 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms