Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3F3CQ6NXT2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 AC007322.4-201ENST00000509611 723 ntBASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 AC083906.2-201ENST00000511578 360 ntBASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H3F3CQ6NXT2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 KRT16P2-201ENST00000414673 1423 ntBASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.49■□□□□ 0.71
H3F3CQ6NXT2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 AC133552.2-202ENST00000575694 574 ntBASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
H3F3CQ6NXT2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
H3F3CQ6NXT2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 AC068338.2-201ENST00000563278 1430 ntBASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 TSPY6P-201ENST00000448518 926 ntBASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3CQ6NXT2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 GUSBP6-202ENST00000438529 1198 ntBASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 AC142086.2-201ENST00000569753 217 ntBASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms