Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H2AA3Q6FI13 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H2AA3Q6FI13 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 TPRG1LP1-201ENST00000598702 760 ntBASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.34■□□□□ 0.85
HIST2H2AA3Q6FI13 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 AC027612.3-201ENST00000413684 1047 ntBASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.33■□□□□ 0.85
HIST2H2AA3Q6FI13 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HIST2H2AA3Q6FI13 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.33■□□□□ 0.84
HIST2H2AA3Q6FI13 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
HIST2H2AA3Q6FI13 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
HIST2H2AA3Q6FI13 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIST2H2AA3Q6FI13 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HIST2H2AA3Q6FI13 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H2AA3Q6FI13 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST2H2AA3Q6FI13 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.3■□□□□ 0.84
HIST2H2AA3Q6FI13 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms