Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.38■□□□□ 0.85
DEPDC1Q5TB30 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC1Q5TB30 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.38■□□□□ 0.85
DEPDC1Q5TB30 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC1Q5TB30 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
DEPDC1Q5TB30 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC1Q5TB30 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.38■□□□□ 0.85
DEPDC1Q5TB30 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.38■□□□□ 0.85
DEPDC1Q5TB30 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC1Q5TB30 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 AC003102.1-202ENST00000563394 1796 ntBASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 IRS3P-201ENST00000223076 1006 ntBASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 AL354811.1-201ENST00000610286 706 ntBASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC1Q5TB30 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 AL358852.1-201ENST00000623174 1268 ntBASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DEPDC1Q5TB30 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 AC055733.4-201ENST00000638462 1354 ntBASIC20.34■□□□□ 0.85
DEPDC1Q5TB30 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 AC005224.4-201ENST00000583262 1652 ntBASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DEPDC1Q5TB30 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DEPDC1Q5TB30 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
DEPDC1Q5TB30 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.33■□□□□ 0.84
DEPDC1Q5TB30 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DEPDC1Q5TB30 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
DEPDC1Q5TB30 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DEPDC1Q5TB30 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.33■□□□□ 0.84
DEPDC1Q5TB30 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms