Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 AC006128.1-201ENST00000624704 1661 ntBASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRIF1Q5T3J3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 BX842568.3-201ENST00000418104 571 ntBASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIF1Q5T3J3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 PLK5-205ENST00000642079 1969 ntBASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIF1Q5T3J3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRIF1Q5T3J3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRIF1Q5T3J3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRIF1Q5T3J3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
LRIF1Q5T3J3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.83■□□□□ 0.76
LRIF1Q5T3J3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRIF1Q5T3J3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LRIF1Q5T3J3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
LRIF1Q5T3J3 AP005212.1-201ENST00000581547 1997 ntBASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms