Protein–RNA interactions for Protein: Q53HC0

CCDC92, Coiled-coil domain-containing protein 92, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC92Q53HC0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC92Q53HC0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC92Q53HC0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC92Q53HC0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC92Q53HC0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC92Q53HC0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC92Q53HC0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC92Q53HC0 AC087289.5-201ENST00000586076 3175 ntBASIC19.27■□□□□ 0.67
CCDC92Q53HC0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC92Q53HC0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC92Q53HC0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 SRD5A1P1-201ENST00000442297 786 ntBASIC19.26■□□□□ 0.67
CCDC92Q53HC0 pRNA.6-201ENST00000610482 90 ntBASIC19.26■□□□□ 0.67
CCDC92Q53HC0 pRNA.5-201ENST00000612139 90 ntBASIC19.26■□□□□ 0.67
CCDC92Q53HC0 pRNA.11-201ENST00000618423 90 ntBASIC19.26■□□□□ 0.67
CCDC92Q53HC0 pRNA.13-201ENST00000619112 90 ntBASIC19.26■□□□□ 0.67
CCDC92Q53HC0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC92Q53HC0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 MIR4466-201ENST00000606121 54 ntBASIC19.25■□□□□ 0.67
CCDC92Q53HC0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.25■□□□□ 0.67
CCDC92Q53HC0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC92Q53HC0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC92Q53HC0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 LINC01960-201ENST00000563759 1884 ntBASIC19.23■□□□□ 0.67
CCDC92Q53HC0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC92Q53HC0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 AC133637.1-201ENST00000624115 1537 ntBASIC19.22■□□□□ 0.67
CCDC92Q53HC0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 AC131281.2-201ENST00000520478 145 ntBASIC19.22■□□□□ 0.67
CCDC92Q53HC0 AC242852.2-201ENST00000615738 1807 ntBASIC19.22■□□□□ 0.67
CCDC92Q53HC0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC92Q53HC0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms