Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST3H3Q16695 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST3H3Q16695 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST3H3Q16695 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST3H3Q16695 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.64■□□□□ 0.57
HIST3H3Q16695 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST3H3Q16695 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST3H3Q16695 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HIST3H3Q16695 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
HIST3H3Q16695 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HIST3H3Q16695 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST3H3Q16695 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HIST3H3Q16695 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 AC005229.4-201ENST00000610085 2198 ntBASIC18.62■□□□□ 0.57
HIST3H3Q16695 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HIST3H3Q16695 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST3H3Q16695 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.61■□□□□ 0.57
HIST3H3Q16695 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST3H3Q16695 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST3H3Q16695 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST3H3Q16695 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.61■□□□□ 0.57
HIST3H3Q16695 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST3H3Q16695 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.61■□□□□ 0.57
HIST3H3Q16695 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HIST3H3Q16695 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST3H3Q16695 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST3H3Q16695 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HIST3H3Q16695 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST3H3Q16695 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.6■□□□□ 0.57
HIST3H3Q16695 AF106564.1-201ENST00000607058 2553 ntBASIC18.6■□□□□ 0.57
HIST3H3Q16695 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIST3H3Q16695 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.6■□□□□ 0.57
HIST3H3Q16695 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIST3H3Q16695 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST3H3Q16695 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.6■□□□□ 0.57
HIST3H3Q16695 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST3H3Q16695 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.6■□□□□ 0.57
HIST3H3Q16695 CCDC92B-201ENST00000575506 885 ntBASIC18.6■□□□□ 0.57
HIST3H3Q16695 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST3H3Q16695 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST3H3Q16695 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.6■□□□□ 0.57
HIST3H3Q16695 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST3H3Q16695 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST3H3Q16695 AL049796.1-201ENST00000565336 1766 ntBASIC18.6■□□□□ 0.57
HIST3H3Q16695 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST3H3Q16695 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST3H3Q16695 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST3H3Q16695 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST3H3Q16695 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
HIST3H3Q16695 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST3H3Q16695 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST3H3Q16695 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HIST3H3Q16695 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HIST3H3Q16695 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST3H3Q16695 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST3H3Q16695 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST3H3Q16695 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST3H3Q16695 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.59■□□□□ 0.57
HIST3H3Q16695 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST3H3Q16695 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST3H3Q16695 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST3H3Q16695 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST3H3Q16695 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.58■□□□□ 0.57
HIST3H3Q16695 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HIST3H3Q16695 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST3H3Q16695 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST3H3Q16695 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HIST3H3Q16695 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST3H3Q16695 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.58■□□□□ 0.56
HIST3H3Q16695 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST3H3Q16695 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST3H3Q16695 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST3H3Q16695 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.58■□□□□ 0.56
HIST3H3Q16695 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms