Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LRP1Q07954 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LRP1Q07954 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.61□□□□□ -0.39
LRP1Q07954 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.61□□□□□ -0.39
LRP1Q07954 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
LRP1Q07954 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.61□□□□□ -0.39
LRP1Q07954 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.61□□□□□ -0.39
LRP1Q07954 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LRP1Q07954 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC12.61□□□□□ -0.39
LRP1Q07954 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRP1Q07954 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.6□□□□□ -0.39
LRP1Q07954 REXO1L12P-201ENST00000622156 912 ntBASIC12.6□□□□□ -0.39
LRP1Q07954 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC12.6□□□□□ -0.39
LRP1Q07954 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.6□□□□□ -0.39
LRP1Q07954 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC12.6□□□□□ -0.39
LRP1Q07954 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
LRP1Q07954 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC12.6□□□□□ -0.39
LRP1Q07954 ANOS2P-203ENST00000472227 1816 ntBASIC12.6□□□□□ -0.39
LRP1Q07954 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC12.6□□□□□ -0.39
LRP1Q07954 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LRP1Q07954 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LRP1Q07954 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.6□□□□□ -0.39
LRP1Q07954 FXN-202ENST00000396364 980 ntTSL 5 BASIC12.6□□□□□ -0.39
LRP1Q07954 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.6□□□□□ -0.39
LRP1Q07954 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC12.59□□□□□ -0.39
LRP1Q07954 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
LRP1Q07954 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LRP1Q07954 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LRP1Q07954 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC12.59□□□□□ -0.39
LRP1Q07954 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC12.59□□□□□ -0.39
LRP1Q07954 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.59□□□□□ -0.39
LRP1Q07954 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LRP1Q07954 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LRP1Q07954 C2orf69P4-201ENST00000565394 541 ntBASIC12.59□□□□□ -0.39
LRP1Q07954 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.59□□□□□ -0.39
LRP1Q07954 FGF8-207ENST00000618991 856 ntTSL 3 BASIC12.59□□□□□ -0.39
LRP1Q07954 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC12.59□□□□□ -0.39
LRP1Q07954 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LRP1Q07954 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.59□□□□□ -0.39
LRP1Q07954 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.59□□□□□ -0.39
LRP1Q07954 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC12.59□□□□□ -0.39
LRP1Q07954 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC12.59□□□□□ -0.39
LRP1Q07954 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
LRP1Q07954 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC12.59□□□□□ -0.39
LRP1Q07954 KRT16P2-201ENST00000414673 1423 ntBASIC12.59□□□□□ -0.39
LRP1Q07954 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.39
LRP1Q07954 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LRP1Q07954 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
LRP1Q07954 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRP1Q07954 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRP1Q07954 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LRP1Q07954 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRP1Q07954 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.58□□□□□ -0.4
LRP1Q07954 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.58□□□□□ -0.4
LRP1Q07954 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRP1Q07954 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.58□□□□□ -0.4
LRP1Q07954 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC12.58□□□□□ -0.4
LRP1Q07954 RN7SL850P-201ENST00000579959 291 ntBASIC12.58□□□□□ -0.4
LRP1Q07954 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.58□□□□□ -0.4
LRP1Q07954 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRP1Q07954 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LRP1Q07954 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.58□□□□□ -0.4
LRP1Q07954 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LRP1Q07954 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LRP1Q07954 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRP1Q07954 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRP1Q07954 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LRP1Q07954 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.57□□□□□ -0.4
LRP1Q07954 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRP1Q07954 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LRP1Q07954 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LRP1Q07954 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms