Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.71■□□□□ 0.91
CDKL1Q00532 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL1Q00532 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL1Q00532 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL1Q00532 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.7■□□□□ 0.91
CDKL1Q00532 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.7■□□□□ 0.9
CDKL1Q00532 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL1Q00532 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL1Q00532 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
CDKL1Q00532 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL1Q00532 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL1Q00532 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL1Q00532 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.7■□□□□ 0.9
CDKL1Q00532 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL1Q00532 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.7■□□□□ 0.9
CDKL1Q00532 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL1Q00532 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL1Q00532 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.7■□□□□ 0.9
CDKL1Q00532 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.7■□□□□ 0.9
CDKL1Q00532 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.69■□□□□ 0.9
CDKL1Q00532 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.69■□□□□ 0.9
CDKL1Q00532 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.69■□□□□ 0.9
CDKL1Q00532 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.69■□□□□ 0.9
CDKL1Q00532 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.69■□□□□ 0.9
CDKL1Q00532 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDKL1Q00532 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL1Q00532 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDKL1Q00532 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL1Q00532 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDKL1Q00532 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDKL1Q00532 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.68■□□□□ 0.9
CDKL1Q00532 MIR638-201ENST00000385237 100 ntBASIC20.68■□□□□ 0.9
CDKL1Q00532 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL1Q00532 AL358852.1-201ENST00000623174 1268 ntBASIC20.68■□□□□ 0.9
CDKL1Q00532 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL1Q00532 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL1Q00532 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL1Q00532 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.67■□□□□ 0.9
CDKL1Q00532 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDKL1Q00532 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.67■□□□□ 0.9
CDKL1Q00532 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL1Q00532 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CDKL1Q00532 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL1Q00532 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDKL1Q00532 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL1Q00532 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.66■□□□□ 0.9
CDKL1Q00532 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.66■□□□□ 0.9
CDKL1Q00532 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKL1Q00532 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKL1Q00532 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDKL1Q00532 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL1Q00532 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
CDKL1Q00532 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
CDKL1Q00532 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKL1Q00532 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL1Q00532 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
CDKL1Q00532 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDKL1Q00532 AL157384.1-201ENST00000445995 2473 ntBASIC20.65■□□□□ 0.9
CDKL1Q00532 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKL1Q00532 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDKL1Q00532 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.65■□□□□ 0.9
CDKL1Q00532 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.65■□□□□ 0.9
CDKL1Q00532 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.65■□□□□ 0.9
CDKL1Q00532 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 RNF165-205ENST00000588679 2904 ntBASIC20.65■□□□□ 0.9
CDKL1Q00532 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDKL1Q00532 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKL1Q00532 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDKL1Q00532 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CDKL1Q00532 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDKL1Q00532 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKL1Q00532 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms