Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEP78395 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEP78395 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEP78395 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.2■□□□□ 0.98
PRAMEP78395 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PRAMEP78395 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.2■□□□□ 0.98
PRAMEP78395 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PRAMEP78395 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PRAMEP78395 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEP78395 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PRAMEP78395 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PRAMEP78395 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEP78395 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.2■□□□□ 0.98
PRAMEP78395 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PRAMEP78395 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEP78395 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
PRAMEP78395 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEP78395 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PRAMEP78395 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 IRS3P-201ENST00000223076 1006 ntBASIC21.19■□□□□ 0.98
PRAMEP78395 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.19■□□□□ 0.98
PRAMEP78395 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.19■□□□□ 0.98
PRAMEP78395 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.19■□□□□ 0.98
PRAMEP78395 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.19■□□□□ 0.98
PRAMEP78395 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEP78395 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PRAMEP78395 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEP78395 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEP78395 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEP78395 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEP78395 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEP78395 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.18■□□□□ 0.98
PRAMEP78395 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEP78395 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEP78395 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.18■□□□□ 0.98
PRAMEP78395 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEP78395 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEP78395 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEP78395 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEP78395 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRAMEP78395 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEP78395 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEP78395 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEP78395 MIR6084-201ENST00000622012 110 ntBASIC21.17■□□□□ 0.98
PRAMEP78395 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEP78395 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRAMEP78395 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEP78395 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEP78395 SLC25A24-204ENST00000569674 2357 ntBASIC21.17■□□□□ 0.98
PRAMEP78395 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEP78395 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEP78395 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEP78395 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRAMEP78395 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEP78395 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRAMEP78395 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PRAMEP78395 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.16■□□□□ 0.98
PRAMEP78395 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEP78395 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.16■□□□□ 0.98
PRAMEP78395 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.16■□□□□ 0.98
PRAMEP78395 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.16■□□□□ 0.98
PRAMEP78395 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PRAMEP78395 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEP78395 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEP78395 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEP78395 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRAMEP78395 FEM1AP4-201ENST00000443167 1987 ntBASIC21.16■□□□□ 0.98
PRAMEP78395 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEP78395 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEP78395 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEP78395 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PRAMEP78395 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
PRAMEP78395 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEP78395 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEP78395 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.15■□□□□ 0.98
PRAMEP78395 AC005229.4-201ENST00000610085 2198 ntBASIC21.15■□□□□ 0.98
PRAMEP78395 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.15■□□□□ 0.98
PRAMEP78395 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEP78395 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.15■□□□□ 0.98
PRAMEP78395 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms