Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN18P56856 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLDN18P56856 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLDN18P56856 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 C11orf96-202ENST00000528572 1834 ntBASIC18.89■□□□□ 0.61
CLDN18P56856 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN18P56856 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN18P56856 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.89■□□□□ 0.61
CLDN18P56856 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN18P56856 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLDN18P56856 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN18P56856 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN18P56856 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN18P56856 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN18P56856 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLDN18P56856 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN18P56856 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN18P56856 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLDN18P56856 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLDN18P56856 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN18P56856 MIR663A-201ENST00000385250 93 ntBASIC18.88■□□□□ 0.61
CLDN18P56856 CNN2P6-201ENST00000439038 900 ntBASIC18.88■□□□□ 0.61
CLDN18P56856 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CLDN18P56856 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.88■□□□□ 0.61
CLDN18P56856 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN18P56856 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN18P56856 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN18P56856 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN18P56856 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN18P56856 AC007322.1-201ENST00000426983 750 ntBASIC18.87■□□□□ 0.61
CLDN18P56856 TERF1P5-201ENST00000477545 1207 ntBASIC18.87■□□□□ 0.61
CLDN18P56856 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN18P56856 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.87■□□□□ 0.61
CLDN18P56856 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN18P56856 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN18P56856 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN18P56856 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN18P56856 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN18P56856 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CLDN18P56856 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN18P56856 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLDN18P56856 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLDN18P56856 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN18P56856 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.86■□□□□ 0.61
CLDN18P56856 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN18P56856 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
CLDN18P56856 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN18P56856 ID1-201ENST00000376105 1233 ntBASIC18.86■□□□□ 0.61
CLDN18P56856 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 AC006970.2-201ENST00000450065 779 ntBASIC18.86■□□□□ 0.61
CLDN18P56856 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN18P56856 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN18P56856 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN18P56856 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN18P56856 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN18P56856 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLDN18P56856 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN18P56856 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN18P56856 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN18P56856 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN18P56856 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN18P56856 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN18P56856 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN18P56856 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms