Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.72■□□□□ 0.59
CAV3P56539 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CAV3P56539 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CAV3P56539 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.71■□□□□ 0.59
CAV3P56539 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CAV3P56539 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.71■□□□□ 0.59
CAV3P56539 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CAV3P56539 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAV3P56539 AC009102.2-201ENST00000606772 1639 ntBASIC18.71■□□□□ 0.58
CAV3P56539 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.71■□□□□ 0.58
CAV3P56539 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
CAV3P56539 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CAV3P56539 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CAV3P56539 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CAV3P56539 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.7■□□□□ 0.58
CAV3P56539 AC104564.3-201ENST00000582367 638 ntBASIC18.7■□□□□ 0.58
CAV3P56539 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAV3P56539 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CAV3P56539 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.69■□□□□ 0.58
CAV3P56539 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.69■□□□□ 0.58
CAV3P56539 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.69■□□□□ 0.58
CAV3P56539 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.69■□□□□ 0.58
CAV3P56539 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.69■□□□□ 0.58
CAV3P56539 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.69■□□□□ 0.58
CAV3P56539 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.69■□□□□ 0.58
CAV3P56539 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CAV3P56539 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.69■□□□□ 0.58
CAV3P56539 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.69■□□□□ 0.58
CAV3P56539 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.69■□□□□ 0.58
CAV3P56539 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAV3P56539 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CAV3P56539 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.68■□□□□ 0.58
CAV3P56539 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.68■□□□□ 0.58
CAV3P56539 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.68■□□□□ 0.58
CAV3P56539 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.68■□□□□ 0.58
CAV3P56539 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.68■□□□□ 0.58
CAV3P56539 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.68■□□□□ 0.58
CAV3P56539 AL512631.2-201ENST00000604634 923 ntBASIC18.68■□□□□ 0.58
CAV3P56539 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.68■□□□□ 0.58
CAV3P56539 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAV3P56539 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAV3P56539 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAV3P56539 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAV3P56539 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAV3P56539 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.67■□□□□ 0.58
CAV3P56539 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAV3P56539 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CAV3P56539 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.67■□□□□ 0.58
CAV3P56539 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CAV3P56539 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.67■□□□□ 0.58
CAV3P56539 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAV3P56539 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CAV3P56539 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.67■□□□□ 0.58
CAV3P56539 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms