Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH12P55289 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH12P55289 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH12P55289 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH12P55289 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDH12P55289 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDH12P55289 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH12P55289 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH12P55289 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
CDH12P55289 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH12P55289 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH12P55289 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH12P55289 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
CDH12P55289 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.58■□□□□ 0.73
CDH12P55289 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH12P55289 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH12P55289 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH12P55289 AC131212.1-201ENST00000613771 668 ntBASIC19.58■□□□□ 0.72
CDH12P55289 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CDH12P55289 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH12P55289 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CDH12P55289 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH12P55289 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH12P55289 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH12P55289 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH12P55289 LINC01006-201ENST00000333319 2292 ntBASIC19.58■□□□□ 0.72
CDH12P55289 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH12P55289 AL049796.1-201ENST00000565336 1766 ntBASIC19.57■□□□□ 0.72
CDH12P55289 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH12P55289 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDH12P55289 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH12P55289 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH12P55289 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDH12P55289 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH12P55289 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDH12P55289 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDH12P55289 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH12P55289 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH12P55289 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH12P55289 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH12P55289 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH12P55289 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDH12P55289 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDH12P55289 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDH12P55289 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 UNC93B3-201ENST00000308076 687 ntBASIC19.56■□□□□ 0.72
CDH12P55289 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH12P55289 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH12P55289 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH12P55289 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH12P55289 AL034346.1-201ENST00000568244 1277 ntBASIC19.55■□□□□ 0.72
CDH12P55289 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 MIR4767-201ENST00000582827 78 ntBASIC19.55■□□□□ 0.72
CDH12P55289 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH12P55289 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CDH12P55289 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH12P55289 AC003102.1-202ENST00000563394 1796 ntBASIC19.55■□□□□ 0.72
CDH12P55289 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDH12P55289 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CDH12P55289 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH12P55289 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH12P55289 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH12P55289 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDH12P55289 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms