Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIMK2P53671 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIMK2P53671 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.24■□□□□ 0.99
LIMK2P53671 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.24■□□□□ 0.99
LIMK2P53671 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
LIMK2P53671 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIMK2P53671 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK2P53671 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK2P53671 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.23■□□□□ 0.99
LIMK2P53671 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK2P53671 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK2P53671 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.23■□□□□ 0.99
LIMK2P53671 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.23■□□□□ 0.99
LIMK2P53671 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.23■□□□□ 0.99
LIMK2P53671 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK2P53671 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.23■□□□□ 0.99
LIMK2P53671 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.23■□□□□ 0.99
LIMK2P53671 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.23■□□□□ 0.99
LIMK2P53671 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.23■□□□□ 0.99
LIMK2P53671 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LIMK2P53671 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LIMK2P53671 LINC02228-203ENST00000641970 1355 ntBASIC21.23■□□□□ 0.99
LIMK2P53671 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.22■□□□□ 0.99
LIMK2P53671 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK2P53671 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK2P53671 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK2P53671 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK2P53671 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK2P53671 IKBKGP1-201ENST00000612193 1073 ntBASIC21.22■□□□□ 0.99
LIMK2P53671 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LIMK2P53671 AC105233.4-201ENST00000642045 216 ntBASIC21.22■□□□□ 0.99
LIMK2P53671 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK2P53671 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK2P53671 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LIMK2P53671 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.22■□□□□ 0.99
LIMK2P53671 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK2P53671 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LIMK2P53671 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.21■□□□□ 0.99
LIMK2P53671 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LIMK2P53671 KRT18P14-201ENST00000534205 1250 ntBASIC21.21■□□□□ 0.99
LIMK2P53671 TERF1P2-201ENST00000583350 1212 ntBASIC21.21■□□□□ 0.99
LIMK2P53671 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.21■□□□□ 0.99
LIMK2P53671 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LIMK2P53671 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.21■□□□□ 0.99
LIMK2P53671 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK2P53671 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.21■□□□□ 0.99
LIMK2P53671 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LIMK2P53671 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LIMK2P53671 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.21■□□□□ 0.99
LIMK2P53671 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.21■□□□□ 0.99
LIMK2P53671 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.2■□□□□ 0.98
LIMK2P53671 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.2■□□□□ 0.98
LIMK2P53671 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.2■□□□□ 0.98
LIMK2P53671 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.2■□□□□ 0.98
LIMK2P53671 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.2■□□□□ 0.98
LIMK2P53671 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.2■□□□□ 0.98
LIMK2P53671 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK2P53671 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK2P53671 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK2P53671 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.19■□□□□ 0.98
LIMK2P53671 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.19■□□□□ 0.98
LIMK2P53671 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.19■□□□□ 0.98
LIMK2P53671 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.19■□□□□ 0.98
LIMK2P53671 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.19■□□□□ 0.98
LIMK2P53671 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.19■□□□□ 0.98
LIMK2P53671 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.19■□□□□ 0.98
LIMK2P53671 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LIMK2P53671 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.19■□□□□ 0.98
LIMK2P53671 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK2P53671 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.19■□□□□ 0.98
LIMK2P53671 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.18■□□□□ 0.98
LIMK2P53671 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LIMK2P53671 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms