Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.11■■□□□ 1.61
NEK4P51957 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.11■■□□□ 1.61
NEK4P51957 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
NEK4P51957 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
NEK4P51957 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
NEK4P51957 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.61
NEK4P51957 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.1■■□□□ 1.61
NEK4P51957 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
NEK4P51957 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.1■■□□□ 1.61
NEK4P51957 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
NEK4P51957 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.1■■□□□ 1.61
NEK4P51957 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.1■■□□□ 1.61
NEK4P51957 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK4P51957 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
NEK4P51957 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.09■■□□□ 1.61
NEK4P51957 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.09■■□□□ 1.61
NEK4P51957 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK4P51957 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NEK4P51957 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.08■■□□□ 1.61
NEK4P51957 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
NEK4P51957 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.08■■□□□ 1.61
NEK4P51957 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.08■■□□□ 1.61
NEK4P51957 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
NEK4P51957 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
NEK4P51957 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NEK4P51957 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
NEK4P51957 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NEK4P51957 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
NEK4P51957 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.07■■□□□ 1.6
NEK4P51957 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.07■■□□□ 1.6
NEK4P51957 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.07■■□□□ 1.6
NEK4P51957 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NEK4P51957 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NEK4P51957 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
NEK4P51957 SLC25A24-204ENST00000569674 2357 ntBASIC25.07■■□□□ 1.6
NEK4P51957 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.06■■□□□ 1.6
NEK4P51957 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
NEK4P51957 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
NEK4P51957 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK4P51957 AC099791.1-201ENST00000416440 715 ntBASIC25.06■■□□□ 1.6
NEK4P51957 AC096631.2-201ENST00000436136 790 ntBASIC25.06■■□□□ 1.6
NEK4P51957 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NEK4P51957 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.06■■□□□ 1.6
NEK4P51957 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.06■■□□□ 1.6
NEK4P51957 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
NEK4P51957 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NEK4P51957 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK4P51957 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.06■■□□□ 1.6
NEK4P51957 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK4P51957 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NEK4P51957 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
NEK4P51957 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.05■■□□□ 1.6
NEK4P51957 PBX2P1-201ENST00000493219 1291 ntBASIC25.05■■□□□ 1.6
NEK4P51957 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.05■■□□□ 1.6
NEK4P51957 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.05■■□□□ 1.6
NEK4P51957 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
NEK4P51957 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.05■■□□□ 1.6
NEK4P51957 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK4P51957 AC008406.3-201ENST00000620001 1374 ntBASIC25.05■■□□□ 1.6
NEK4P51957 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.04■■□□□ 1.6
NEK4P51957 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.04■■□□□ 1.6
NEK4P51957 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.04■■□□□ 1.6
NEK4P51957 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
NEK4P51957 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.04■■□□□ 1.6
NEK4P51957 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
NEK4P51957 AC055733.4-201ENST00000638462 1354 ntBASIC25.04■■□□□ 1.6
NEK4P51957 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK4P51957 AC009237.3-201ENST00000393279 1427 ntBASIC25.03■■□□□ 1.6
NEK4P51957 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NEK4P51957 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.03■■□□□ 1.6
NEK4P51957 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.03■■□□□ 1.6
NEK4P51957 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.03■■□□□ 1.6
NEK4P51957 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms