Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.92■■□□□ 1.42
USP11P51784 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.92■■□□□ 1.42
USP11P51784 AC061975.6-201ENST00000579045 1553 ntBASIC23.92■■□□□ 1.42
USP11P51784 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP11P51784 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP11P51784 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP11P51784 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP11P51784 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP11P51784 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.92■■□□□ 1.42
USP11P51784 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USP11P51784 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.92■■□□□ 1.42
USP11P51784 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USP11P51784 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.92■■□□□ 1.42
USP11P51784 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
USP11P51784 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP11P51784 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.91■■□□□ 1.42
USP11P51784 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
USP11P51784 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.42
USP11P51784 SLC7A5P2-201ENST00000553010 536 ntBASIC23.91■■□□□ 1.42
USP11P51784 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.91■■□□□ 1.42
USP11P51784 AL137784.2-201ENST00000607332 1000 ntBASIC23.91■■□□□ 1.42
USP11P51784 AC120498.10-201ENST00000621827 505 ntBASIC23.91■■□□□ 1.42
USP11P51784 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.91■■□□□ 1.42
USP11P51784 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
USP11P51784 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
USP11P51784 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
USP11P51784 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
USP11P51784 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP11P51784 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
USP11P51784 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
USP11P51784 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
USP11P51784 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.9■■□□□ 1.42
USP11P51784 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.9■■□□□ 1.42
USP11P51784 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.9■■□□□ 1.42
USP11P51784 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.9■■□□□ 1.42
USP11P51784 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 UBE2DNL-204ENST00000602536 740 ntBASIC23.9■■□□□ 1.42
USP11P51784 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.9■■□□□ 1.42
USP11P51784 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 KRT16P2-201ENST00000414673 1423 ntBASIC23.9■■□□□ 1.42
USP11P51784 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.9■■□□□ 1.42
USP11P51784 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.9■■□□□ 1.42
USP11P51784 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.9■■□□□ 1.42
USP11P51784 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
USP11P51784 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.89■■□□□ 1.42
USP11P51784 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
USP11P51784 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
USP11P51784 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
USP11P51784 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
USP11P51784 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
USP11P51784 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
USP11P51784 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
USP11P51784 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.89■■□□□ 1.41
USP11P51784 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
USP11P51784 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
USP11P51784 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
USP11P51784 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.89■■□□□ 1.41
USP11P51784 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.89■■□□□ 1.41
USP11P51784 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
USP11P51784 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.89■■□□□ 1.41
USP11P51784 LINC00565-201ENST00000562710 2331 ntBASIC23.89■■□□□ 1.41
USP11P51784 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
USP11P51784 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.89■■□□□ 1.41
USP11P51784 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
USP11P51784 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.88■■□□□ 1.41
USP11P51784 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.88■■□□□ 1.41
USP11P51784 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.88■■□□□ 1.41
USP11P51784 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.88■■□□□ 1.41
USP11P51784 MYCNOS-205ENST00000641950 531 ntBASIC23.88■■□□□ 1.41
USP11P51784 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
USP11P51784 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
USP11P51784 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
USP11P51784 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.87■■□□□ 1.41
USP11P51784 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
USP11P51784 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.87■■□□□ 1.41
USP11P51784 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
USP11P51784 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
USP11P51784 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
USP11P51784 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
USP11P51784 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
USP11P51784 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.87■■□□□ 1.41
USP11P51784 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms