Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLCSP50747 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
HLCSP50747 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.09■□□□□ 0.81
HLCSP50747 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLCSP50747 LINC02228-203ENST00000641970 1355 ntBASIC20.09■□□□□ 0.81
HLCSP50747 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HLCSP50747 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLCSP50747 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLCSP50747 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
HLCSP50747 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.09■□□□□ 0.81
HLCSP50747 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.09■□□□□ 0.81
HLCSP50747 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLCSP50747 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
HLCSP50747 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HLCSP50747 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLCSP50747 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLCSP50747 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HLCSP50747 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.08■□□□□ 0.81
HLCSP50747 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLCSP50747 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLCSP50747 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLCSP50747 RNF165-205ENST00000588679 2904 ntBASIC20.08■□□□□ 0.81
HLCSP50747 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLCSP50747 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLCSP50747 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.08■□□□□ 0.81
HLCSP50747 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLCSP50747 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLCSP50747 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLCSP50747 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLCSP50747 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HLCSP50747 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLCSP50747 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HLCSP50747 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLCSP50747 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.07■□□□□ 0.8
HLCSP50747 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLCSP50747 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLCSP50747 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.07■□□□□ 0.8
HLCSP50747 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HLCSP50747 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HLCSP50747 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.07■□□□□ 0.8
HLCSP50747 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.07■□□□□ 0.8
HLCSP50747 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLCSP50747 DUX4L2-201ENST00000561772 1275 ntBASIC20.07■□□□□ 0.8
HLCSP50747 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
HLCSP50747 DUX4L6-201ENST00000626483 1275 ntBASIC20.07■□□□□ 0.8
HLCSP50747 DUX4L1-201ENST00000627662 1275 ntBASIC20.07■□□□□ 0.8
HLCSP50747 DUX4L8-201ENST00000629013 1275 ntBASIC20.07■□□□□ 0.8
HLCSP50747 DUX4L3-201ENST00000630187 1275 ntBASIC20.07■□□□□ 0.8
HLCSP50747 DUX4L7-201ENST00000630678 1275 ntBASIC20.07■□□□□ 0.8
HLCSP50747 DUX4L5-201ENST00000630834 1275 ntBASIC20.07■□□□□ 0.8
HLCSP50747 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.07■□□□□ 0.8
HLCSP50747 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HLCSP50747 OXCT2P1-201ENST00000447263 1535 ntBASIC20.07■□□□□ 0.8
HLCSP50747 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLCSP50747 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLCSP50747 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.06■□□□□ 0.8
HLCSP50747 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HLCSP50747 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HLCSP50747 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLCSP50747 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLCSP50747 CCDC92B-201ENST00000575506 885 ntBASIC20.06■□□□□ 0.8
HLCSP50747 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HLCSP50747 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLCSP50747 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLCSP50747 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HLCSP50747 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.06■□□□□ 0.8
HLCSP50747 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLCSP50747 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
HLCSP50747 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.05■□□□□ 0.8
HLCSP50747 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HLCSP50747 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLCSP50747 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.05■□□□□ 0.8
HLCSP50747 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.05■□□□□ 0.8
HLCSP50747 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HLCSP50747 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.05■□□□□ 0.8
HLCSP50747 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.05■□□□□ 0.8
HLCSP50747 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.05■□□□□ 0.8
HLCSP50747 TERF1P2-201ENST00000583350 1212 ntBASIC20.05■□□□□ 0.8
HLCSP50747 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLCSP50747 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLCSP50747 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLCSP50747 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLCSP50747 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HLCSP50747 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.04■□□□□ 0.8
HLCSP50747 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HLCSP50747 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HLCSP50747 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HLCSP50747 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HLCSP50747 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.04■□□□□ 0.8
HLCSP50747 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.04■□□□□ 0.8
HLCSP50747 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLCSP50747 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms