Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A6P48664 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A6P48664 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC1A6P48664 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A6P48664 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A6P48664 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A6P48664 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC1A6P48664 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A6P48664 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A6P48664 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A6P48664 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A6P48664 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.91
SLC1A6P48664 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
SLC1A6P48664 AP005212.1-201ENST00000581547 1997 ntBASIC20.7■□□□□ 0.9
SLC1A6P48664 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A6P48664 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A6P48664 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A6P48664 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A6P48664 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A6P48664 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SLC1A6P48664 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A6P48664 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A6P48664 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A6P48664 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A6P48664 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A6P48664 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A6P48664 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC1A6P48664 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC1A6P48664 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A6P48664 AC073314.1-201ENST00000568729 2216 ntBASIC20.69■□□□□ 0.9
SLC1A6P48664 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC1A6P48664 PLK5-205ENST00000642079 1969 ntBASIC20.68■□□□□ 0.9
SLC1A6P48664 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC1A6P48664 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SLC1A6P48664 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SLC1A6P48664 KRT16P3-201ENST00000439127 1283 ntBASIC20.68■□□□□ 0.9
SLC1A6P48664 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SLC1A6P48664 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SLC1A6P48664 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A6P48664 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A6P48664 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A6P48664 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A6P48664 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A6P48664 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A6P48664 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A6P48664 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SLC1A6P48664 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A6P48664 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A6P48664 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A6P48664 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.67■□□□□ 0.9
SLC1A6P48664 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A6P48664 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A6P48664 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SLC1A6P48664 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SLC1A6P48664 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC1A6P48664 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A6P48664 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A6P48664 AL356740.2-201ENST00000601559 647 ntBASIC20.66■□□□□ 0.9
SLC1A6P48664 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLC1A6P48664 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A6P48664 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC1A6P48664 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A6P48664 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC1A6P48664 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms